Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Snora81-201ENSMUST00000157310 178 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm22895-201ENSMUST00000157508 308 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Scarna13-201ENSMUST00000158164 275 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm23855-201ENSMUST00000158377 135 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm5946-201ENSMUST00000182340 970 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm28683-201ENSMUST00000187134 615 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm28840-205ENSMUST00000189320 615 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm28835-203ENSMUST00000190062 615 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm37700-201ENSMUST00000192617 965 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm38330-201ENSMUST00000192743 959 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm18843-201ENSMUST00000194982 719 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm33952-201ENSMUST00000197795 408 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm23459-201ENSMUST00000083259 131 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
Vps28Q9D1C8 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Vps28Q9D1C8 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Vps28Q9D1C8 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Vps28Q9D1C8 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm12281-201ENSMUST00000119536 298 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm13488-201ENSMUST00000120419 179 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm22530-201ENSMUST00000158820 118 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm44074-201ENSMUST00000204562 337 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm44795-201ENSMUST00000205496 319 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm3912-203ENSMUST00000211024 367 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm5457-201ENSMUST00000022260 333 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Vps28Q9D1C8 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Vps28Q9D1C8 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms