Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nkx3-1P97436 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm12007-201ENSMUST00000120978 597 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm15388-201ENSMUST00000121578 726 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm11910-201ENSMUST00000121624 432 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm6632-201ENSMUST00000168425 954 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm29332-201ENSMUST00000190829 227 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm37700-201ENSMUST00000192617 965 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm18150-201ENSMUST00000195341 645 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm3912-203ENSMUST00000211024 367 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.41□□□□□ -1.7
Nkx3-1P97436 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Nkx3-1P97436 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.4□□□□□ -1.7
Nkx3-1P97436 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.4□□□□□ -1.7
Nkx3-1P97436 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.4□□□□□ -1.7
Nkx3-1P97436 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Mir292-201ENSMUST00000104847 82 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm12073-201ENSMUST00000117382 524 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm12413-201ENSMUST00000121508 312 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm24188-201ENSMUST00000157980 108 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm6647-201ENSMUST00000170514 641 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm28503-201ENSMUST00000185966 147 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm2497-201ENSMUST00000189539 601 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm36991-201ENSMUST00000191800 648 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm42720-201ENSMUST00000196813 300 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm44952-201ENSMUST00000204443 433 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.4□□□□□ -1.71
Nkx3-1P97436 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 AC161252.2-201ENSMUST00000224978 374 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.4□□□□□ -1.71
Nkx3-1P97436 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms