Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm24590-201ENSMUST00000116699 119 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm15361-201ENSMUST00000119320 444 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm14046-201ENSMUST00000119389 509 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm11835-201ENSMUST00000120635 663 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm7931-201ENSMUST00000121537 271 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm26346-201ENSMUST00000157525 329 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm23082-201ENSMUST00000157852 133 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm25013-201ENSMUST00000158402 128 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm7952-201ENSMUST00000180540 984 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Mir6992-201ENSMUST00000183342 109 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm27225-201ENSMUST00000183833 557 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm27636-201ENSMUST00000184528 122 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm19030-201ENSMUST00000194947 552 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm37676-201ENSMUST00000195496 507 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm17838-201ENSMUST00000205872 876 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm8523-201ENSMUST00000211386 552 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm43594-201ENSMUST00000201153 3442 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Svet1-201ENSMUST00000209370 3940 ntBASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc9Q8VC31 Gm7709-201ENSMUST00000199391 1858 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm13961-201ENSMUST00000119282 4772 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm12760-201ENSMUST00000117861 482 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 H3f3c-201ENSMUST00000119459 411 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm12591-201ENSMUST00000122407 1177 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm22514-201ENSMUST00000122547 308 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm25806-201ENSMUST00000122782 122 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm29552-201ENSMUST00000190548 660 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm44382-201ENSMUST00000198683 122 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm5990-201ENSMUST00000203126 746 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm6590-201ENSMUST00000203343 687 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Gm45724-201ENSMUST00000213031 420 ntBASIC6.26□□□□□ -1.41
Ccdc9Q8VC31 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms