Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm17824-201ENSMUST00000197690 805 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44266-201ENSMUST00000205235 500 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm38574-201ENSMUST00000211855 640 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 AC141642.1-201ENSMUST00000220598 229 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm25512-201ENSMUST00000083863 107 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm10205-201ENSMUST00000087431 234 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm24272-201ENSMUST00000102329 98 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm24173-201ENSMUST00000104130 128 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm13983-201ENSMUST00000118018 865 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12937-201ENSMUST00000118333 448 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15181-201ENSMUST00000120142 177 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm22276-201ENSMUST00000122469 129 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm22235-201ENSMUST00000157085 110 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm23674-201ENSMUST00000157473 131 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm27998-201ENSMUST00000184902 361 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm18448-201ENSMUST00000186286 599 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm28843-201ENSMUST00000189198 678 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm29546-201ENSMUST00000191171 678 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm37511-201ENSMUST00000192901 294 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm37715-201ENSMUST00000193206 235 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm38237-201ENSMUST00000193366 376 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44990-201ENSMUST00000203922 217 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 AC124524.2-201ENSMUST00000223940 588 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms