Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm25795-201ENSMUST00000104421 132 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm22771-201ENSMUST00000104449 91 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm22710-201ENSMUST00000116892 125 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm8692-201ENSMUST00000118102 438 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm12890-201ENSMUST00000120885 373 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm4660-201ENSMUST00000131499 403 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.56□□□□□ -1.36
Cntn3Q07409 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm25962-201ENSMUST00000157173 168 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm22836-201ENSMUST00000158441 61 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Mir6238-201ENSMUST00000184140 129 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm27653-201ENSMUST00000185037 136 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.56□□□□□ -1.36
Cntn3Q07409 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm46234-201ENSMUST00000218702 259 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cntn3Q07409 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.56□□□□□ -1.36
Cntn3Q07409 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cntn3Q07409 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
Cntn3Q07409 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.55□□□□□ -1.36
Cntn3Q07409 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cntn3Q07409 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cntn3Q07409 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm12077-201ENSMUST00000117049 364 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm11821-201ENSMUST00000117335 979 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm14173-201ENSMUST00000117690 278 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm14794-201ENSMUST00000118181 192 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm14293-201ENSMUST00000118528 577 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC6.55□□□□□ -1.36
Cntn3Q07409 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm21999-201ENSMUST00000165985 387 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.55□□□□□ -1.36
Cntn3Q07409 Gm27512-201ENSMUST00000175328 126 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.55□□□□□ -1.36
Cntn3Q07409 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms