Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox9Q04887 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox9Q04887 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Sox9Q04887 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm13193-201ENSMUST00000117275 225 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm14854-201ENSMUST00000117758 841 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm4989-201ENSMUST00000118711 749 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox9Q04887 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm11896-201ENSMUST00000121105 820 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm23429-201ENSMUST00000122486 149 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Snora81-201ENSMUST00000157310 178 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sox9Q04887 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm8023-201ENSMUST00000195298 903 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Mir5121-201ENSMUST00000198528 74 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm32158-201ENSMUST00000200135 404 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox9Q04887 AC160970.1-201ENSMUST00000219311 475 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox9Q04887 AC192616.3-201ENSMUST00000220797 1124 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm5457-201ENSMUST00000022260 333 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 AC150560.3-201ENSMUST00000227442 455 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm25187-201ENSMUST00000083906 133 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox9Q04887 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Gm14797-201ENSMUST00000119378 1480 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sox9Q04887 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.14□□□□□ -1.43
Sox9Q04887 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Sox9Q04887 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox9Q04887 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm24590-201ENSMUST00000116699 119 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm13607-201ENSMUST00000117875 539 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm11550-201ENSMUST00000118210 699 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm15490-201ENSMUST00000119894 387 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm14898-201ENSMUST00000120202 645 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm12041-201ENSMUST00000121606 602 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm24393-201ENSMUST00000158135 97 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm16236-201ENSMUST00000159588 379 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm3221-201ENSMUST00000164869 440 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm17511-201ENSMUST00000172206 342 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm17907-201ENSMUST00000173150 710 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm22857-201ENSMUST00000174969 134 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm27659-201ENSMUST00000183472 98 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm28094-201ENSMUST00000185262 390 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms