Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx3-1P97436 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx3-1P97436 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx3-1P97436 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm9408-201ENSMUST00000197375 1505 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm25595-201ENSMUST00000102273 97 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm12281-201ENSMUST00000119536 298 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm11484-201ENSMUST00000119808 338 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm26607-201ENSMUST00000180661 867 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm20203-201ENSMUST00000192352 332 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm36986-201ENSMUST00000195320 353 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm9238-201ENSMUST00000196181 329 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 AC171206.1-201ENSMUST00000213612 213 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm43526-201ENSMUST00000196666 1565 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.43□□□□□ -1.7
Nkx3-1P97436 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Nkx3-1P97436 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm8145-201ENSMUST00000118220 745 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm24628-201ENSMUST00000122761 289 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm25271-201ENSMUST00000157273 290 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Esd-ps-201ENSMUST00000170684 847 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm8993-201ENSMUST00000182182 983 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm5285-201ENSMUST00000193089 666 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm20586-201ENSMUST00000210122 547 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm8911-201ENSMUST00000213986 652 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm6906-201ENSMUST00000218014 569 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm2645-201ENSMUST00000223516 547 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Gm25147-201ENSMUST00000083030 105 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC4.42□□□□□ -1.7
Nkx3-1P97436 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nkx3-1P97436 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Nkx3-1P97436 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms