Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Clp1Q99LI9 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clp1Q99LI9 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Clp1Q99LI9 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clp1Q99LI9 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clp1Q99LI9 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm7974-201ENSMUST00000117154 408 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm15901-201ENSMUST00000117663 941 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm14785-201ENSMUST00000120185 539 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm24315-201ENSMUST00000177835 127 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm21728-201ENSMUST00000188442 695 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm21889-201ENSMUST00000188487 695 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm29201-201ENSMUST00000189120 431 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm8419-201ENSMUST00000189886 412 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm21920-201ENSMUST00000190042 695 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm45026-201ENSMUST00000205292 833 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm45473-201ENSMUST00000211452 616 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 AC168059.1-201ENSMUST00000225846 841 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 AC154532.2-201ENSMUST00000228947 598 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.8□□□□□ -1.32
Clp1Q99LI9 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Clp1Q99LI9 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Clp1Q99LI9 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm14442-201ENSMUST00000119690 1736 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm13803-201ENSMUST00000117547 489 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm14173-201ENSMUST00000117690 278 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm8692-201ENSMUST00000118102 438 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Mup-ps2-201ENSMUST00000142602 533 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Mir6367-201ENSMUST00000183385 102 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm28474-201ENSMUST00000188501 315 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm28080-201ENSMUST00000188552 722 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm37966-201ENSMUST00000193122 326 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm5284-201ENSMUST00000199053 903 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm44910-201ENSMUST00000208451 396 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm46223-201ENSMUST00000215196 675 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Gm18409-202ENSMUST00000220105 529 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.79□□□□□ -1.32
Clp1Q99LI9 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC6.79□□□□□ -1.32
Clp1Q99LI9 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms