Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox3P53784 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sox3P53784 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.98□□□□□ -1.61
Sox3P53784 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sox3P53784 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sox3P53784 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sox3P53784 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sox3P53784 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
Sox3P53784 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
Sox3P53784 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sox3P53784 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Sox3P53784 Gm16394-201ENSMUST00000117289 675 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm13771-201ENSMUST00000117988 238 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm13506-201ENSMUST00000120391 1083 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.98□□□□□ -1.61
Sox3P53784 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.98□□□□□ -1.61
Sox3P53784 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.98□□□□□ -1.61
Sox3P53784 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sox3P53784 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sox3P53784 Gm7688-201ENSMUST00000212857 337 ntBASIC4.98□□□□□ -1.61
Sox3P53784 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm2099-201ENSMUST00000220979 412 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.98□□□□□ -1.61
Sox3P53784 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.98□□□□□ -1.61
Sox3P53784 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.98□□□□□ -1.61
Sox3P53784 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.98□□□□□ -1.61
Sox3P53784 AV026068-237ENSMUST00000226075 572 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sox3P53784 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sox3P53784 Gm24919-201ENSMUST00000083020 106 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sox3P53784 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sox3P53784 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.98□□□□□ -1.61
Sox3P53784 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Sox3P53784 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Sox3P53784 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Sox3P53784 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Sox3P53784 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm22899-201ENSMUST00000104540 131 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm13213-201ENSMUST00000119668 474 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Gm14563-201ENSMUST00000120571 354 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Gm12466-201ENSMUST00000121199 620 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Gm25291-201ENSMUST00000122795 144 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm37444-201ENSMUST00000193605 439 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.97□□□□□ -1.61
Sox3P53784 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Gm23511-201ENSMUST00000083084 164 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.97□□□□□ -1.61
Sox3P53784 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sox3P53784 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sox3P53784 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.96□□□□□ -1.61
Sox3P53784 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.96□□□□□ -1.61
Sox3P53784 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.96□□□□□ -1.61
Sox3P53784 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Sox3P53784 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Sox3P53784 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Sox3P53784 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Sox3P53784 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms