Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm18150-201ENSMUST00000195341 645 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm42542-201ENSMUST00000197978 268 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm45228-201ENSMUST00000206585 352 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm8679-201ENSMUST00000210651 1036 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm6362-201ENSMUST00000217686 836 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm6558-201ENSMUST00000191934 1973 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Scrt1Q99M85 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.58□□□□□ -1.68
Scrt1Q99M85 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm24125-201ENSMUST00000104105 137 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm24170-201ENSMUST00000104124 133 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm13149-201ENSMUST00000122071 339 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm26153-201ENSMUST00000157433 127 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm25665-201ENSMUST00000157695 110 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm26170-201ENSMUST00000158419 148 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm16285-201ENSMUST00000162999 347 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm37336-202ENSMUST00000193705 468 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm9173-201ENSMUST00000198054 400 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm9278-201ENSMUST00000205508 553 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm8911-201ENSMUST00000213986 652 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm10540-201ENSMUST00000097581 276 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.57□□□□□ -1.68
Scrt1Q99M85 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scrt1Q99M85 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.56□□□□□ -1.68
Scrt1Q99M85 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Scrt1Q99M85 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC4.56□□□□□ -1.68
Scrt1Q99M85 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Mir292-201ENSMUST00000104847 82 ntBASIC4.56□□□□□ -1.68
Scrt1Q99M85 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Scrt1Q99M85 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms