Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Mir1193-201ENSMUST00000116761 121 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Gm15779-201ENSMUST00000117470 412 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Gm12231-201ENSMUST00000119447 695 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Gm13737-201ENSMUST00000119793 232 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Gm14037-201ENSMUST00000120576 313 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Gm43580-201ENSMUST00000202892 284 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.57□□□□□ -1.36
Col16a1Q8BLX7 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm44171-201ENSMUST00000203701 2109 ntBASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm12717-201ENSMUST00000118427 983 ntBASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm23046-201ENSMUST00000158369 284 ntBASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm37123-201ENSMUST00000192994 1171 ntBASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 AC137961.1-201ENSMUST00000227924 734 ntBASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col16a1Q8BLX7 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Gm11251-201ENSMUST00000119593 2800 ntBASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Gm23273-201ENSMUST00000104058 135 ntBASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Gm16463-201ENSMUST00000120527 721 ntBASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Gm13232-201ENSMUST00000121816 632 ntBASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Gm6988-201ENSMUST00000222676 375 ntBASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col16a1Q8BLX7 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm13503-201ENSMUST00000119017 446 ntBASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm13220-201ENSMUST00000121535 508 ntBASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm26828-201ENSMUST00000180640 172 ntBASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm18426-201ENSMUST00000191874 973 ntBASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm6546-201ENSMUST00000192096 766 ntBASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC6.54□□□□□ -1.36
Col16a1Q8BLX7 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms