Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm27414-201ENSMUST00000185033 381 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm28097-201ENSMUST00000187333 366 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm37444-201ENSMUST00000193605 439 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm6988-201ENSMUST00000222676 375 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Cxcl12P40224 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.27□□□□□ -1.57
Cxcl12P40224 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Cxcl12P40224 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cxcl12P40224 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Cxcl12P40224 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cxcl12P40224 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm23014-201ENSMUST00000104144 130 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Zakit-201ENSMUST00000157677 308 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm3084-201ENSMUST00000169967 598 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cxcl12P40224 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cxcl12P40224 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cxcl12P40224 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.26□□□□□ -1.57
Cxcl12P40224 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cxcl12P40224 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cxcl12P40224 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cxcl12P40224 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cxcl12P40224 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm13733-201ENSMUST00000117290 535 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm14933-201ENSMUST00000118840 481 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm12186-201ENSMUST00000119050 945 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm6884-201ENSMUST00000119318 615 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm15390-201ENSMUST00000120323 738 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm13220-201ENSMUST00000121535 508 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm11679-201ENSMUST00000121830 779 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.25□□□□□ -1.57
Cxcl12P40224 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm3145-201ENSMUST00000188584 220 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm43436-201ENSMUST00000199308 147 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm43136-201ENSMUST00000200403 636 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Snord22-201ENSMUST00000083153 126 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm23686-201ENSMUST00000083241 164 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
Cxcl12P40224 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cxcl12P40224 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cxcl12P40224 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.25□□□□□ -1.57
Cxcl12P40224 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.24□□□□□ -1.57
Cxcl12P40224 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cxcl12P40224 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.24□□□□□ -1.57
Cxcl12P40224 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cxcl12P40224 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.24□□□□□ -1.57
Cxcl12P40224 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Cxcl12P40224 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.24□□□□□ -1.57
Cxcl12P40224 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms