Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col2a1P28481 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col2a1P28481 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col2a1P28481 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.71□□□□□ -1.49
Col2a1P28481 Gm17915-201ENSMUST00000222077 548 ntBASIC5.71□□□□□ -1.49
Col2a1P28481 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
Col2a1P28481 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.71□□□□□ -1.49
Col2a1P28481 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col2a1P28481 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.71□□□□□ -1.49
Col2a1P28481 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Col2a1P28481 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col2a1P28481 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.49
Col2a1P28481 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
Col2a1P28481 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.49
Col2a1P28481 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col2a1P28481 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col2a1P28481 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col2a1P28481 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col2a1P28481 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.71□□□□□ -1.5
Col2a1P28481 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col2a1P28481 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Gm26146-201ENSMUST00000104478 185 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Gm23608-201ENSMUST00000104545 128 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Gm12328-201ENSMUST00000118611 197 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col2a1P28481 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.71□□□□□ -1.5
Col2a1P28481 Gm27875-201ENSMUST00000184425 123 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col2a1P28481 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Gm6719-201ENSMUST00000202067 335 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.71□□□□□ -1.5
Col2a1P28481 Gm44648-201ENSMUST00000208267 329 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.71□□□□□ -1.5
Col2a1P28481 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.7□□□□□ -1.5
Col2a1P28481 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.7□□□□□ -1.5
Col2a1P28481 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Gm24124-201ENSMUST00000104103 132 ntBASIC5.7□□□□□ -1.5
Col2a1P28481 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.7□□□□□ -1.5
Col2a1P28481 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Gm26098-201ENSMUST00000157247 288 ntBASIC5.7□□□□□ -1.5
Col2a1P28481 Gm25427-201ENSMUST00000157605 103 ntBASIC5.7□□□□□ -1.5
Col2a1P28481 Gm4412-201ENSMUST00000186660 433 ntBASIC5.7□□□□□ -1.5
Col2a1P28481 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col2a1P28481 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.7□□□□□ -1.5
Col2a1P28481 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.7□□□□□ -1.5
Col2a1P28481 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Col2a1P28481 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.7□□□□□ -1.5
Col2a1P28481 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col2a1P28481 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Col2a1P28481 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col2a1P28481 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col2a1P28481 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col2a1P28481 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col2a1P28481 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col2a1P28481 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col2a1P28481 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col2a1P28481 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col2a1P28481 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col2a1P28481 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col2a1P28481 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col2a1P28481 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col2a1P28481 Gm12988-201ENSMUST00000119054 478 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Gm11910-201ENSMUST00000121624 432 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Gm12752-201ENSMUST00000121657 811 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Gm15905-201ENSMUST00000137042 298 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col2a1P28481 Gm24477-201ENSMUST00000157438 103 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col2a1P28481 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Col2a1P28481 Mir6344-201ENSMUST00000183462 104 ntBASIC5.69□□□□□ -1.5
Col2a1P28481 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms