Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.9□□□□□ -1.46
Col1a1P11087 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.9□□□□□ -1.46
Col1a1P11087 Gm44648-201ENSMUST00000208267 329 ntBASIC5.9□□□□□ -1.46
Col1a1P11087 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Col1a1P11087 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col1a1P11087 Gm23875-201ENSMUST00000083711 318 ntBASIC5.9□□□□□ -1.46
Col1a1P11087 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col1a1P11087 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col1a1P11087 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.9□□□□□ -1.46
Col1a1P11087 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col1a1P11087 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.9□□□□□ -1.46
Col1a1P11087 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Col1a1P11087 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col1a1P11087 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col1a1P11087 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col1a1P11087 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.9□□□□□ -1.47
Col1a1P11087 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.9□□□□□ -1.47
Col1a1P11087 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.9□□□□□ -1.47
Col1a1P11087 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.9□□□□□ -1.47
Col1a1P11087 Mir6344-201ENSMUST00000183462 104 ntBASIC5.9□□□□□ -1.47
Col1a1P11087 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.9□□□□□ -1.47
Col1a1P11087 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.9□□□□□ -1.47
Col1a1P11087 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.9□□□□□ -1.47
Col1a1P11087 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.9□□□□□ -1.47
Col1a1P11087 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.9□□□□□ -1.47
Col1a1P11087 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.9□□□□□ -1.47
Col1a1P11087 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col1a1P11087 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col1a1P11087 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.89□□□□□ -1.47
Col1a1P11087 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col1a1P11087 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col1a1P11087 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col1a1P11087 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col1a1P11087 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col1a1P11087 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.89□□□□□ -1.47
Col1a1P11087 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col1a1P11087 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Col1a1P11087 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col1a1P11087 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col1a1P11087 Gm24124-201ENSMUST00000104103 132 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col1a1P11087 Gm15779-201ENSMUST00000117470 412 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Gm6884-201ENSMUST00000119318 615 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Gm14881-201ENSMUST00000120366 372 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Gm23046-201ENSMUST00000158369 284 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Gm28615-201ENSMUST00000187527 482 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Gm5734-201ENSMUST00000189787 913 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Gm3189-201ENSMUST00000205595 832 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.89□□□□□ -1.47
Col1a1P11087 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Mecom-201ENSMUST00000061088 348 ntBASIC5.89□□□□□ -1.47
Col1a1P11087 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col1a1P11087 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col1a1P11087 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col1a1P11087 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col1a1P11087 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col1a1P11087 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col1a1P11087 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.88□□□□□ -1.47
Col1a1P11087 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Gm42772-201ENSMUST00000199945 3041 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col1a1P11087 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Col1a1P11087 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Col1a1P11087 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 Gm14878-201ENSMUST00000118167 293 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Gm9308-201ENSMUST00000119073 448 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.88□□□□□ -1.47
Col1a1P11087 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC5.88□□□□□ -1.47
Col1a1P11087 Gm25907-201ENSMUST00000158486 125 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 Gm37719-201ENSMUST00000194615 292 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.88□□□□□ -1.47
Col1a1P11087 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.88□□□□□ -1.47
Col1a1P11087 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col1a1P11087 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms