Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.52□□□□□ -1.37
Hoxc9P09633 AW046200-203ENSMUST00000211787 2479 ntBASIC6.52□□□□□ -1.37
Hoxc9P09633 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Hoxc9P09633 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxc9P09633 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxc9P09633 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxc9P09633 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxc9P09633 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Gm24125-201ENSMUST00000104105 137 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxc9P09633 Gm16082-201ENSMUST00000115992 377 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 Gm14985-201ENSMUST00000118693 786 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 Gm14831-201ENSMUST00000120253 409 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 Gm14587-201ENSMUST00000121714 658 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 Gm22343-201ENSMUST00000122648 286 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 Gm16107-201ENSMUST00000162523 862 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.51□□□□□ -1.37
Hoxc9P09633 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxc9P09633 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxc9P09633 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.51□□□□□ -1.37
Hoxc9P09633 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxc9P09633 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Hoxc9P09633 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Hoxc9P09633 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Hoxc9P09633 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.5□□□□□ -1.37
Hoxc9P09633 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm13733-201ENSMUST00000117290 535 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm24444-201ENSMUST00000157244 308 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm16571-201ENSMUST00000159112 291 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm18802-201ENSMUST00000186270 888 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm6366-201ENSMUST00000198766 826 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm44402-201ENSMUST00000203677 238 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Hoxc9P09633 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm45129-201ENSMUST00000208444 2224 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.5□□□□□ -1.37
Hoxc9P09633 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Hoxc9P09633 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxc9P09633 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxc9P09633 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm44171-201ENSMUST00000203701 2109 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Hoxc9P09633 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm12717-201ENSMUST00000118427 983 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Hoxc9P09633 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm8614-201ENSMUST00000182528 978 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Mir1957b-201ENSMUST00000184608 123 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm44138-201ENSMUST00000204939 271 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm44648-201ENSMUST00000208267 329 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Gm8137-201ENSMUST00000218997 463 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.49□□□□□ -1.37
Hoxc9P09633 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms