Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm13329-201ENSMUST00000117063 265 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm11902-201ENSMUST00000118849 270 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Apc-ps1-201ENSMUST00000119356 470 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm29657-201ENSMUST00000189807 342 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm36961-201ENSMUST00000191980 132 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm36939-201ENSMUST00000194889 439 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm38079-201ENSMUST00000195603 154 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm7452-201ENSMUST00000200764 788 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Zg16-202ENSMUST00000205424 682 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 AC155712.1-201ENSMUST00000219704 160 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm46317-201ENSMUST00000221103 393 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Rfx3-208ENSMUST00000174850 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm44667-201ENSMUST00000207632 3337 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 AL662807.2-201ENSMUST00000224024 3335 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Sez6l2-202ENSMUST00000106333 3595 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Bgn-201ENSMUST00000033741 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Nkx1-1G3UXB3 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 Mark3-206ENSMUST00000221459 2807 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 Gja1-201ENSMUST00000068581 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 AC153862.1-201ENSMUST00000215700 3349 ntBASIC8.77□□□□□ -1
Nkx1-1G3UXB3 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC8.77□□□□□ -1
Nkx1-1G3UXB3 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Sp100-202ENSMUST00000066427 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Phf19-201ENSMUST00000028232 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Dhrs7b-202ENSMUST00000108718 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gm38169-201ENSMUST00000191822 2539 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gm17170-201ENSMUST00000112785 316 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gm15538-201ENSMUST00000121410 313 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gm12517-201ENSMUST00000122082 425 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gm22408-201ENSMUST00000174925 65 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gm37477-201ENSMUST00000195215 884 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 CT025665.1-201ENSMUST00000215251 1199 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 AC126685.1-201ENSMUST00000221001 121 ntBASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gm33994-201ENSMUST00000193724 2414 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Fgd3-201ENSMUST00000048716 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nkx1-1G3UXB3 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Afap1l2-202ENSMUST00000118800 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Gm38105-201ENSMUST00000192112 2621 ntBASIC8.76□□□□□ -1.01
Nkx1-1G3UXB3 Gm37802-201ENSMUST00000194998 2643 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms