Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm44402-201ENSMUST00000203677 238 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm19921-201ENSMUST00000210505 703 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm18116-201ENSMUST00000220920 537 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Mir20a-201ENSMUST00000083508 107 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Defa-ps11-201ENSMUST00000119719 299 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Mir8090-201ENSMUST00000185078 136 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm5084-202ENSMUST00000224064 3609 ntBASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col6a3E9PWQ3 Gm43953-201ENSMUST00000203709 2867 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Mir678-201ENSMUST00000102114 84 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm11278-201ENSMUST00000121002 997 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm26486-201ENSMUST00000158021 110 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm29031-201ENSMUST00000185316 614 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm29000-201ENSMUST00000185444 614 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm28204-201ENSMUST00000185934 614 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm28290-201ENSMUST00000186505 614 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm28161-201ENSMUST00000186669 614 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm28749-209ENSMUST00000189599 614 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm33163-201ENSMUST00000194504 614 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm18120-201ENSMUST00000220079 511 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm24068-201ENSMUST00000104513 132 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm12335-201ENSMUST00000119738 327 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm7099-201ENSMUST00000080066 554 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Gm9239-201ENSMUST00000186942 2557 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.84□□□□□ -1.63
Col6a3E9PWQ3 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Gm11781-201ENSMUST00000118328 472 ntBASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a3E9PWQ3 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Gm43496-201ENSMUST00000201682 3001 ntBASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a3E9PWQ3 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms