Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Gm27039-201ENSMUST00000182438 962 ntBASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Gm10048-201ENSMUST00000194196 372 ntBASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Gm17775-201ENSMUST00000198542 258 ntBASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Gm8137-201ENSMUST00000218997 463 ntBASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.67□□□□□ -1.5
Rsph3bQ9DA80 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm15670-201ENSMUST00000117740 447 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm11699-201ENSMUST00000119016 401 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm16254-201ENSMUST00000131528 730 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm23700-201ENSMUST00000158842 102 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm3053-201ENSMUST00000161709 616 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm9499-201ENSMUST00000180888 964 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm28468-201ENSMUST00000188536 615 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm9057-201ENSMUST00000198791 296 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm42452-201ENSMUST00000199749 617 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm7721-201ENSMUST00000200446 546 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm44134-202ENSMUST00000204777 545 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm8911-201ENSMUST00000213986 652 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Supt4b-201ENSMUST00000214434 351 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm23626-201ENSMUST00000082458 133 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Mir17-201ENSMUST00000083574 84 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm10705-201ENSMUST00000098980 461 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rsph3bQ9DA80 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm22468-201ENSMUST00000116680 120 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm26248-201ENSMUST00000116700 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm26137-201ENSMUST00000116701 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm26190-201ENSMUST00000116704 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm24617-201ENSMUST00000116705 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm25778-201ENSMUST00000116713 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm25774-201ENSMUST00000116717 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm22102-201ENSMUST00000116730 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm23177-201ENSMUST00000116784 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm24193-201ENSMUST00000116801 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm24744-201ENSMUST00000116833 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm24427-201ENSMUST00000116896 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm22346-201ENSMUST00000116918 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm23606-201ENSMUST00000116938 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm22029-201ENSMUST00000116940 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm26298-201ENSMUST00000116956 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm23844-201ENSMUST00000116959 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm24484-201ENSMUST00000117009 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm25347-201ENSMUST00000117026 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm22112-201ENSMUST00000117032 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm12734-201ENSMUST00000120228 948 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm15791-201ENSMUST00000120365 319 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm14125-202ENSMUST00000120921 756 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm12444-201ENSMUST00000121512 877 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm11759-201ENSMUST00000121742 464 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm22991-201ENSMUST00000178126 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm25754-201ENSMUST00000178653 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm22419-201ENSMUST00000178780 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm24802-201ENSMUST00000178897 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm25208-201ENSMUST00000178964 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm24567-201ENSMUST00000179294 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm23943-201ENSMUST00000179712 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm25228-201ENSMUST00000180121 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm9457-201ENSMUST00000180176 372 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm23304-201ENSMUST00000180209 121 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Mir7056-201ENSMUST00000183776 59 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm4321-201ENSMUST00000200520 442 ntBASIC5.65□□□□□ -1.5
Rsph3bQ9DA80 Gm45845-201ENSMUST00000207326 582 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms