Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm16394-201ENSMUST00000117289 675 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm11550-201ENSMUST00000118210 699 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm14046-201ENSMUST00000119389 509 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm25389-201ENSMUST00000157340 286 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm6047-201ENSMUST00000167221 574 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm29454-201ENSMUST00000190805 393 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm18036-201ENSMUST00000195256 272 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm7721-201ENSMUST00000200446 546 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm4602-201ENSMUST00000203198 308 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm44795-201ENSMUST00000205496 319 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm26330-201ENSMUST00000082817 104 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Snord59a-201ENSMUST00000082844 74 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.44□□□□□ -1.54
Upf3bQ3ULL6 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm11212-201ENSMUST00000118337 618 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm13172-201ENSMUST00000118685 256 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm14520-201ENSMUST00000119258 387 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm14587-201ENSMUST00000121714 658 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm27266-201ENSMUST00000184521 123 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm27818-201ENSMUST00000184536 159 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm44456-201ENSMUST00000196554 89 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm8911-201ENSMUST00000213986 652 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Gm23514-201ENSMUST00000082827 130 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Upf3bQ3ULL6 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm15828-201ENSMUST00000119911 522 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm11200-201ENSMUST00000121698 448 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm27528-201ENSMUST00000183544 205 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm8669-201ENSMUST00000183839 945 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Mir7012-201ENSMUST00000183900 64 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm28567-201ENSMUST00000190270 693 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm37044-201ENSMUST00000193531 693 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm38369-201ENSMUST00000195101 693 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm43712-201ENSMUST00000198020 291 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms