Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm18300-201ENSMUST00000192792 1406 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm20789-201ENSMUST00000221002 4195 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm23175-201ENSMUST00000104371 132 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm13220-201ENSMUST00000121535 508 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col17a1Q07563 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm29474-201ENSMUST00000187688 379 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm28926-201ENSMUST00000191063 680 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Ighv3-2-201ENSMUST00000191842 349 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm37560-201ENSMUST00000194289 1000 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm18871-201ENSMUST00000218655 745 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 AC158392.1-201ENSMUST00000223720 1069 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm37211-201ENSMUST00000193392 3433 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Col17a1Q07563 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col17a1Q07563 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col17a1Q07563 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm22473-201ENSMUST00000104114 132 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC8.17□□□□□ -1.1
Col17a1Q07563 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC8.17□□□□□ -1.1
Col17a1Q07563 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm37961-201ENSMUST00000192729 299 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC8.17□□□□□ -1.1
Col17a1Q07563 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm43157-201ENSMUST00000198223 412 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC8.17□□□□□ -1.1
Col17a1Q07563 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col17a1Q07563 AC161426.1-201ENSMUST00000214137 286 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 AC126439.1-201ENSMUST00000226772 2104 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col17a1Q07563 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col17a1Q07563 AC162467.3-201ENSMUST00000219716 2172 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm44897-201ENSMUST00000206187 1341 ntBASIC8.17□□□□□ -1.1
Col17a1Q07563 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.17□□□□□ -1.1
Col17a1Q07563 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC8.17□□□□□ -1.1
Col17a1Q07563 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Col17a1Q07563 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col17a1Q07563 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col17a1Q07563 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Gm43283-201ENSMUST00000199138 2548 ntBASIC8.16□□□□□ -1.1
Col17a1Q07563 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col17a1Q07563 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Gm37400-201ENSMUST00000193148 3605 ntBASIC8.16□□□□□ -1.1
Col17a1Q07563 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Gm24048-201ENSMUST00000102411 106 ntBASIC8.16□□□□□ -1.1
Col17a1Q07563 Gm12094-201ENSMUST00000121781 472 ntBASIC8.16□□□□□ -1.1
Col17a1Q07563 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC8.16□□□□□ -1.1
Col17a1Q07563 Gm25066-201ENSMUST00000158145 123 ntBASIC8.16□□□□□ -1.1
Col17a1Q07563 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC8.16□□□□□ -1.1
Col17a1Q07563 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Col17a1Q07563 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col17a1Q07563 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Gm2497-201ENSMUST00000189539 601 ntBASIC8.16□□□□□ -1.1
Col17a1Q07563 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC8.16□□□□□ -1.1
Col17a1Q07563 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Col17a1Q07563 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Col17a1Q07563 Gm42942-201ENSMUST00000196086 1328 ntBASIC8.16□□□□□ -1.1
Col17a1Q07563 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col17a1Q07563 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Col17a1Q07563 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col17a1Q07563 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col17a1Q07563 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col17a1Q07563 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col17a1Q07563 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Col17a1Q07563 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col17a1Q07563 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col17a1Q07563 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Col17a1Q07563 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms