Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sox9Q04887 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sox9Q04887 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sox9Q04887 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sox9Q04887 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.19□□□□□ -1.42
Sox9Q04887 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Sox9Q04887 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm23942-201ENSMUST00000101956 107 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Sox9Q04887 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm14842-201ENSMUST00000119577 269 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm23205-201ENSMUST00000158671 103 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm15970-201ENSMUST00000160623 834 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm20549-201ENSMUST00000174804 429 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Mir5128-201ENSMUST00000175217 84 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm20674-201ENSMUST00000177452 369 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm29073-201ENSMUST00000185563 664 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC6.19□□□□□ -1.42
Sox9Q04887 Mrgprb13-201ENSMUST00000188191 985 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm29165-201ENSMUST00000190655 664 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm29211-201ENSMUST00000191470 664 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm37511-201ENSMUST00000192901 294 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm6543-201ENSMUST00000197353 808 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm18635-201ENSMUST00000199020 1060 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm43561-201ENSMUST00000199866 448 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm35648-201ENSMUST00000202304 475 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm18861-201ENSMUST00000202509 1186 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm44132-201ENSMUST00000205142 151 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.19□□□□□ -1.42
Sox9Q04887 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm8556-201ENSMUST00000210437 664 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm18587-201ENSMUST00000213736 841 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm5649-201ENSMUST00000217918 951 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm18904-201ENSMUST00000218756 329 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 AC147628.1-201ENSMUST00000228193 688 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Sox9Q04887 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm23459-201ENSMUST00000083259 131 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.19□□□□□ -1.42
Sox9Q04887 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox9Q04887 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.19□□□□□ -1.42
Sox9Q04887 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox9Q04887 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm20679-201ENSMUST00000177285 1402 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm25773-201ENSMUST00000116718 127 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm13077-201ENSMUST00000121941 484 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm24860-201ENSMUST00000158457 276 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm23145-201ENSMUST00000178912 79 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm26950-201ENSMUST00000182734 498 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm27942-201ENSMUST00000184669 101 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm38061-201ENSMUST00000192490 365 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox9Q04887 Gm44494-201ENSMUST00000196760 129 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm43489-201ENSMUST00000196810 993 ntBASIC6.18□□□□□ -1.42
Sox9Q04887 Gm36378-201ENSMUST00000201709 388 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms