Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm43390-201ENSMUST00000196614 421 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Gm42720-201ENSMUST00000196813 300 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
Col2a1P28481 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.77□□□□□ -1.49
Col2a1P28481 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col2a1P28481 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col2a1P28481 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col2a1P28481 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col2a1P28481 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col2a1P28481 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.76□□□□□ -1.49
Col2a1P28481 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.76□□□□□ -1.49
Col2a1P28481 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Col2a1P28481 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col2a1P28481 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col2a1P28481 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col2a1P28481 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.76□□□□□ -1.49
Col2a1P28481 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col2a1P28481 Gm12285-201ENSMUST00000117347 233 ntBASIC5.76□□□□□ -1.49
Col2a1P28481 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.76□□□□□ -1.49
Col2a1P28481 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Gm44820-201ENSMUST00000207420 396 ntBASIC5.76□□□□□ -1.49
Col2a1P28481 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.76□□□□□ -1.49
Col2a1P28481 Gm7128-201ENSMUST00000211639 533 ntBASIC5.76□□□□□ -1.49
Col2a1P28481 Gm8942-201ENSMUST00000217892 400 ntBASIC5.76□□□□□ -1.49
Col2a1P28481 Gm8672-201ENSMUST00000221200 332 ntBASIC5.76□□□□□ -1.49
Col2a1P28481 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col2a1P28481 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col2a1P28481 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col2a1P28481 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col2a1P28481 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 AW046200-203ENSMUST00000211787 2479 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Gm22657-201ENSMUST00000104197 132 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Col2a1P28481 Gm14756-201ENSMUST00000116395 240 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Gm14711-201ENSMUST00000117056 217 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Gm13491-201ENSMUST00000118267 235 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.75□□□□□ -1.49
Col2a1P28481 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col2a1P28481 Gm29036-201ENSMUST00000189967 877 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Gm44603-201ENSMUST00000206820 367 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.75□□□□□ -1.49
Col2a1P28481 Gm31931-201ENSMUST00000219666 222 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.75□□□□□ -1.49
Col2a1P28481 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.75□□□□□ -1.49
Col2a1P28481 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col2a1P28481 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col2a1P28481 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col2a1P28481 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Col2a1P28481 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col2a1P28481 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col2a1P28481 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col2a1P28481 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col2a1P28481 Gm26300-201ENSMUST00000102282 94 ntBASIC5.74□□□□□ -1.49
Col2a1P28481 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Gm13250-201ENSMUST00000117209 753 ntBASIC5.74□□□□□ -1.49
Col2a1P28481 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col2a1P28481 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col2a1P28481 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms