Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm23499-201ENSMUST00000157736 268 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm26509-201ENSMUST00000180947 948 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm8192-201ENSMUST00000182196 958 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm27342-201ENSMUST00000183530 109 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm29464-201ENSMUST00000187692 513 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm6510-201ENSMUST00000195916 574 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd9P28357 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm44279-201ENSMUST00000205154 472 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm45034-201ENSMUST00000206831 482 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd9P28357 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm9267-201ENSMUST00000222831 404 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd9P28357 AC116557.1-201ENSMUST00000219494 1521 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm44424-201ENSMUST00000203438 1826 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd9P28357 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd9P28357 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.38□□□□□ -1.39
Hoxd9P28357 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd9P28357 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd9P28357 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Hoxd9P28357 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd9P28357 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm6215-201ENSMUST00000119297 1386 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm7905-201ENSMUST00000119933 1386 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm6207-201ENSMUST00000120075 1386 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm6228-201ENSMUST00000178856 1386 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm6221-201ENSMUST00000180064 1386 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Mir674-201ENSMUST00000102421 100 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm13156-201ENSMUST00000118348 321 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm12229-201ENSMUST00000120487 468 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm14531-201ENSMUST00000120845 285 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm5809-201ENSMUST00000121854 529 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm14847-201ENSMUST00000121978 519 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm22642-201ENSMUST00000175352 252 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm21070-201ENSMUST00000182425 985 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm8458-201ENSMUST00000196658 819 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm8041-201ENSMUST00000199755 616 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm43513-201ENSMUST00000199779 1076 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm44295-201ENSMUST00000203805 437 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm45700-201ENSMUST00000205866 347 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm19140-201ENSMUST00000209790 421 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm45814-201ENSMUST00000212646 775 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Mir7b-201ENSMUST00000083557 111 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Olfr575-201ENSMUST00000084812 957 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Hoxd9P28357 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.37□□□□□ -1.39
Hoxd9P28357 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms