Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm10241-201ENSMUST00000117664 286 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm3931-201ENSMUST00000119038 455 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm12396-201ENSMUST00000121600 306 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm24685-201ENSMUST00000157764 285 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm24175-201ENSMUST00000158931 129 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm3715-201ENSMUST00000172308 617 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm26923-201ENSMUST00000182615 996 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm37837-201ENSMUST00000191743 604 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm44061-201ENSMUST00000203962 1195 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 AC154245.1-201ENSMUST00000224615 601 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm17752-201ENSMUST00000185787 3726 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc9Q8VC31 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 AC122317.3-201ENSMUST00000219320 3524 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm13172-201ENSMUST00000118685 256 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm23903-201ENSMUST00000157566 131 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm22084-201ENSMUST00000157585 105 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm42539-201ENSMUST00000197009 308 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm43233-201ENSMUST00000200491 616 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm43762-201ENSMUST00000201521 295 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm18290-201ENSMUST00000202900 844 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm43925-201ENSMUST00000203498 206 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 AC126253.2-201ENSMUST00000226518 205 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm22684-201ENSMUST00000082849 132 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm22351-201ENSMUST00000083925 107 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm37461-201ENSMUST00000193929 3704 ntBASIC6.36□□□□□ -1.39
Ccdc9Q8VC31 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Gm2099-202ENSMUST00000223310 3341 ntBASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Gm24235-201ENSMUST00000104319 129 ntBASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Gm7350-201ENSMUST00000120964 636 ntBASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Gm25106-201ENSMUST00000122672 134 ntBASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 n-R5s21-201ENSMUST00000122692 117 ntBASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 Gm25291-201ENSMUST00000122795 144 ntBASIC6.35□□□□□ -1.39
Ccdc9Q8VC31 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms