Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm43968-201ENSMUST00000203388 389 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm18011-201ENSMUST00000203717 565 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm4587-201ENSMUST00000209135 637 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Mir133b-201ENSMUST00000083546 119 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm25187-201ENSMUST00000083906 133 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm13195-201ENSMUST00000117229 261 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm2959-201ENSMUST00000169844 621 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm26607-201ENSMUST00000180661 867 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm18904-201ENSMUST00000218756 329 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Olfr151-202ENSMUST00000221099 929 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.19□□□□□ -1.58
Trub1Q8C0D0 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm22370-201ENSMUST00000102422 83 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm23274-201ENSMUST00000104056 130 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm8202-201ENSMUST00000117682 310 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm12717-201ENSMUST00000118427 983 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm22725-201ENSMUST00000158092 110 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm8358-201ENSMUST00000167222 555 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Mir6416-201ENSMUST00000183664 117 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm28195-201ENSMUST00000186992 372 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm43945-201ENSMUST00000203595 754 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm29781-201ENSMUST00000203862 478 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm32453-201ENSMUST00000204183 456 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm8999-201ENSMUST00000204951 969 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm7768-201ENSMUST00000222988 597 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 AV026068-237ENSMUST00000226075 572 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trub1Q8C0D0 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 286 ms