Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm4660-201ENSMUST00000131499 403 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm26046-201ENSMUST00000157312 166 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm16566-201ENSMUST00000160387 910 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm7316-201ENSMUST00000165395 445 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Mir7211-201ENSMUST00000184071 63 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm28941-201ENSMUST00000185536 1017 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 AC160114.2-201ENSMUST00000223021 300 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm9202-201ENSMUST00000223036 437 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Gm23302-201ENSMUST00000082710 100 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.81□□□□□ -1.64
Tnfsf4P43488 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Tnfsf4P43488 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm11409-201ENSMUST00000118621 403 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm13738-201ENSMUST00000122437 469 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.8□□□□□ -1.64
Tnfsf4P43488 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Tnfsf4P43488 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm43968-201ENSMUST00000203388 389 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm8999-201ENSMUST00000204951 969 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 AC166323.1-201ENSMUST00000217756 367 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Mir338-201ENSMUST00000083666 98 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.8□□□□□ -1.64
Tnfsf4P43488 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Tnfsf4P43488 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm14836-201ENSMUST00000118567 471 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm14082-201ENSMUST00000118582 801 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm15357-201ENSMUST00000119160 285 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm23539-201ENSMUST00000157537 224 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm7152-201ENSMUST00000163570 605 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm9569-201ENSMUST00000187492 787 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm37187-201ENSMUST00000193425 341 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm9173-201ENSMUST00000198054 400 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm42579-201ENSMUST00000200512 734 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.79□□□□□ -1.64
Tnfsf4P43488 Gm44712-201ENSMUST00000206250 1076 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Tnfsf4P43488 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.79□□□□□ -1.64
Tnfsf4P43488 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms