Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm6884-201ENSMUST00000119318 615 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.24□□□□□ -1.73
Col8a2P25318 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a2P25318 Gm23673-201ENSMUST00000157474 298 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm23993-201ENSMUST00000157478 144 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm23965-201ENSMUST00000157969 142 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm24175-201ENSMUST00000158931 129 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC4.24□□□□□ -1.73
Col8a2P25318 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Col8a2P25318 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col8a2P25318 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a2P25318 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a2P25318 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.24□□□□□ -1.73
Col8a2P25318 Gm44253-201ENSMUST00000203387 628 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm18127-201ENSMUST00000208479 725 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a2P25318 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.24□□□□□ -1.73
Col8a2P25318 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.24□□□□□ -1.73
Col8a2P25318 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm7040-201ENSMUST00000223271 443 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col8a2P25318 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a2P25318 Gm25260-201ENSMUST00000083053 134 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gm23796-201ENSMUST00000084011 160 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col8a2P25318 Gm14667-201ENSMUST00000119448 1350 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 AC117608.2-201ENSMUST00000224124 1363 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col8a2P25318 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a2P25318 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.24□□□□□ -1.73
Col8a2P25318 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a2P25318 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a2P25318 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col8a2P25318 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col8a2P25318 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.23□□□□□ -1.73
Col8a2P25318 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col8a2P25318 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Gm38105-201ENSMUST00000192112 2621 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Col8a2P25318 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col8a2P25318 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.23□□□□□ -1.73
Col8a2P25318 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 Gm9317-201ENSMUST00000197055 862 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC4.23□□□□□ -1.73
Col8a2P25318 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Col8a2P25318 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.23□□□□□ -1.73
Col8a2P25318 Gm8137-201ENSMUST00000218997 463 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.23□□□□□ -1.73
Col8a2P25318 AC134439.2-201ENSMUST00000221950 467 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col8a2P25318 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col8a2P25318 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Mir20a-201ENSMUST00000083508 107 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Col8a2P25318 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
Col8a2P25318 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Col8a2P25318 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col8a2P25318 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.23□□□□□ -1.73
Col8a2P25318 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a2P25318 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Col8a2P25318 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a2P25318 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Col8a2P25318 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.22□□□□□ -1.73
Col8a2P25318 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Gm44530-201ENSMUST00000207920 3559 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col8a2P25318 Gm37911-201ENSMUST00000193099 1545 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a2P25318 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a2P25318 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Col8a2P25318 Gm43282-201ENSMUST00000201848 2157 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Col8a2P25318 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col8a2P25318 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col8a2P25318 Gm24789-201ENSMUST00000104282 131 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.22□□□□□ -1.73
Col8a2P25318 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.22□□□□□ -1.73
Col8a2P25318 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Gm13503-201ENSMUST00000119017 446 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Gm14831-201ENSMUST00000120253 409 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Gm12685-201ENSMUST00000121702 214 ntBASIC4.22□□□□□ -1.73
Col8a2P25318 Gm13024-201ENSMUST00000121756 718 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 129.4 ms