Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm7316-201ENSMUST00000165395 445 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm18698-201ENSMUST00000192327 668 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm44392-201ENSMUST00000196758 115 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm43408-201ENSMUST00000198263 440 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm44615-201ENSMUST00000206548 358 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 AC140209.1-201ENSMUST00000227875 284 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm25739-201ENSMUST00000082886 107 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.21□□□□□ -1.42
Syne4Q8CII8 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm42535-201ENSMUST00000197312 1399 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm23692-201ENSMUST00000101881 160 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm11905-201ENSMUST00000117653 678 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm2288-201ENSMUST00000118560 638 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm23872-201ENSMUST00000175432 77 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm6362-201ENSMUST00000217686 836 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm18039-201ENSMUST00000217816 728 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm18618-201ENSMUST00000222211 473 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Diaph3-206ENSMUST00000226745 713 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Syne4Q8CII8 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.2□□□□□ -1.42
Syne4Q8CII8 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Syne4Q8CII8 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm13469-201ENSMUST00000118231 350 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm14930-201ENSMUST00000118864 652 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm11227-201ENSMUST00000119774 471 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm12094-201ENSMUST00000121781 472 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm23883-201ENSMUST00000122686 290 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.19□□□□□ -1.42
Syne4Q8CII8 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm22870-201ENSMUST00000157501 112 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm5277-201ENSMUST00000164923 556 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Syne4Q8CII8 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm4845-201ENSMUST00000179202 562 ntBASIC6.19□□□□□ -1.42
Syne4Q8CII8 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms