Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Col6a6Q8C6K9 Gm20644-201ENSMUST00000176721 2063 ntBASIC4.59□□□□□ -1.68
Col6a6Q8C6K9 AC156569.1-201ENSMUST00000222020 3841 ntBASIC4.59□□□□□ -1.68
Col6a6Q8C6K9 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
Col6a6Q8C6K9 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.59□□□□□ -1.68
Col6a6Q8C6K9 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Mir1193-201ENSMUST00000116761 121 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm14656-201ENSMUST00000120342 502 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm12583-201ENSMUST00000120677 853 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Mir3620-201ENSMUST00000184710 61 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm4321-201ENSMUST00000200520 442 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm43961-201ENSMUST00000203289 1872 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm23273-201ENSMUST00000104058 135 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm14753-201ENSMUST00000118503 246 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm12807-201ENSMUST00000121546 962 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm5699-201ENSMUST00000152491 723 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm21070-201ENSMUST00000182425 985 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Mir6960-201ENSMUST00000183449 61 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm27568-201ENSMUST00000184220 99 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm28468-201ENSMUST00000188536 615 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm19096-201ENSMUST00000209705 766 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Mir412-201ENSMUST00000083636 80 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col6a6Q8C6K9 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm23593-201ENSMUST00000104309 120 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm14998-201ENSMUST00000120502 495 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm6542-201ENSMUST00000153606 772 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm18382-201ENSMUST00000194394 582 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm6366-201ENSMUST00000198766 826 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm22456-201ENSMUST00000082578 125 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm23875-201ENSMUST00000083711 318 ntBASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Col6a6Q8C6K9 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms