Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm45845-201ENSMUST00000207326 582 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm33601-201ENSMUST00000210001 961 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm33178-201ENSMUST00000212090 257 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 AC153936.1-201ENSMUST00000219874 395 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm19095-201ENSMUST00000220533 730 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 AV026068-231ENSMUST00000225862 482 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm4822-201ENSMUST00000077551 479 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.57
Trub1Q8C0D0 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Trub1Q8C0D0 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm9429-201ENSMUST00000117804 868 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm16463-201ENSMUST00000120527 721 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm24371-201ENSMUST00000122662 267 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm23318-201ENSMUST00000158000 108 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm10319-202ENSMUST00000159439 846 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm37030-201ENSMUST00000194254 295 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm44776-201ENSMUST00000207212 381 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm18409-202ENSMUST00000220105 529 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Zfp850-201ENSMUST00000099111 941 ntBASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.21□□□□□ -1.58
Trub1Q8C0D0 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm25418-201ENSMUST00000104214 129 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm13537-201ENSMUST00000120467 267 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm15227-201ENSMUST00000121844 399 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm11197-201ENSMUST00000145158 839 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm25433-201ENSMUST00000158283 286 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm24944-201ENSMUST00000158330 128 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm24860-201ENSMUST00000158457 276 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Mir3080-201ENSMUST00000175010 79 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Mir7008-201ENSMUST00000184398 63 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Mir7674-201ENSMUST00000184964 63 ntBASIC5.2□□□□□ -1.58
Trub1Q8C0D0 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trub1Q8C0D0 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms