Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm13329-201ENSMUST00000117063 265 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm14336-201ENSMUST00000117491 475 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm11908-201ENSMUST00000117755 347 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm12178-201ENSMUST00000120545 330 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm12499-201ENSMUST00000121961 546 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 n-R5s19-201ENSMUST00000122793 120 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm28020-201ENSMUST00000157739 67 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm23182-201ENSMUST00000158688 135 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm25364-201ENSMUST00000158851 107 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim35Q8C006 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm27476-201ENSMUST00000183366 104 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Mir6974-201ENSMUST00000184381 83 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm28288-201ENSMUST00000191019 214 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm10292-202ENSMUST00000193165 585 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm7709-201ENSMUST00000199391 1858 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm43849-201ENSMUST00000201086 215 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm32222-201ENSMUST00000203296 298 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC8.33□□□□□ -1.08
Trim35Q8C006 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 AC124577.1-201ENSMUST00000214044 487 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 AC160958.1-201ENSMUST00000224833 368 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm8394-201ENSMUST00000079684 952 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim35Q8C006 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
Trim35Q8C006 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim35Q8C006 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Olfr155-202ENSMUST00000107860 3480 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim35Q8C006 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Klf10-201ENSMUST00000074043 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim35Q8C006 Gm18637-201ENSMUST00000217665 1900 ntBASIC8.33□□□□□ -1.08
Trim35Q8C006 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim35Q8C006 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Sin3a-207ENSMUST00000168502 4899 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm43230-201ENSMUST00000200980 2129 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Tsnaxip1-201ENSMUST00000034365 2210 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm25607-201ENSMUST00000104020 127 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Anapc15-205ENSMUST00000106978 841 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm11698-201ENSMUST00000117948 455 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm13545-201ENSMUST00000119044 482 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm12917-201ENSMUST00000119850 639 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm11604-201ENSMUST00000121487 742 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm11953-201ENSMUST00000122352 1003 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm22795-201ENSMUST00000157233 118 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm22891-201ENSMUST00000158641 164 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Trp53-ps-201ENSMUST00000166597 141 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm25735-201ENSMUST00000175164 215 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm25145-201ENSMUST00000177640 110 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm17508-201ENSMUST00000181215 681 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm27672-201ENSMUST00000183751 204 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm7115-201ENSMUST00000193706 832 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 AC124772.2-201ENSMUST00000222049 154 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 AC130829.3-201ENSMUST00000222735 154 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 AC125484.1-201ENSMUST00000223218 234 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm4825-201ENSMUST00000079690 408 ntBASIC8.32□□□□□ -1.08
Trim35Q8C006 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim35Q8C006 Ugt2b36-201ENSMUST00000094649 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim35Q8C006 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm37978-201ENSMUST00000194736 2915 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms