Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Nphp4P59240 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nphp4P59240 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nphp4P59240 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nphp4P59240 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nphp4P59240 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Nphp4P59240 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nphp4P59240 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nphp4P59240 Gm23948-201ENSMUST00000104030 132 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Gm24855-201ENSMUST00000104848 97 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Gm13172-201ENSMUST00000118685 256 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Gm13503-201ENSMUST00000119017 446 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Gm12813-201ENSMUST00000119615 902 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Nphp4P59240 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Nphp4P59240 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.91□□□□□ -1.3
Nphp4P59240 Gm28957-201ENSMUST00000190174 373 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Gm43237-201ENSMUST00000196835 1044 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Desi2-202ENSMUST00000069568 1193 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nphp4P59240 Gm5715-201ENSMUST00000196854 1465 ntBASIC6.91□□□□□ -1.3
Nphp4P59240 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Nphp4P59240 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nphp4P59240 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nphp4P59240 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nphp4P59240 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
Nphp4P59240 Gm10727-201ENSMUST00000197107 1602 ntBASIC6.9□□□□□ -1.3
Nphp4P59240 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
Nphp4P59240 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nphp4P59240 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Nphp4P59240 Gm22343-201ENSMUST00000122648 286 ntBASIC6.9□□□□□ -1.31
Nphp4P59240 Gm26034-201ENSMUST00000158154 116 ntBASIC6.9□□□□□ -1.31
Nphp4P59240 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.9□□□□□ -1.31
Nphp4P59240 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.9□□□□□ -1.31
Nphp4P59240 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nphp4P59240 Gm45228-201ENSMUST00000206585 352 ntBASIC6.9□□□□□ -1.31
Nphp4P59240 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.9□□□□□ -1.31
Nphp4P59240 Gm17999-201ENSMUST00000211568 542 ntBASIC6.9□□□□□ -1.31
Nphp4P59240 Gm7128-201ENSMUST00000211639 533 ntBASIC6.9□□□□□ -1.31
Nphp4P59240 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.9□□□□□ -1.31
Nphp4P59240 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Nphp4P59240 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.9□□□□□ -1.31
Nphp4P59240 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nphp4P59240 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Nphp4P59240 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC6.9□□□□□ -1.31
Nphp4P59240 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Nphp4P59240 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
Nphp4P59240 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nphp4P59240 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nphp4P59240 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Nphp4P59240 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nphp4P59240 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Nphp4P59240 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Nphp4P59240 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Nphp4P59240 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Nphp4P59240 Gm26300-201ENSMUST00000102282 94 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC6.89□□□□□ -1.31
Nphp4P59240 Gm25271-201ENSMUST00000157273 290 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nphp4P59240 Gm18791-201ENSMUST00000204611 726 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 AC121986.1-201ENSMUST00000218588 781 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 Gm44751-201ENSMUST00000208302 4387 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Nphp4P59240 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.89□□□□□ -1.31
Nphp4P59240 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Nphp4P59240 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Nphp4P59240 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 Gm45129-201ENSMUST00000208444 2224 ntBASIC6.89□□□□□ -1.31
Nphp4P59240 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Nphp4P59240 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Nphp4P59240 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.88□□□□□ -1.31
Nphp4P59240 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nphp4P59240 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Nphp4P59240 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nphp4P59240 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nphp4P59240 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Nphp4P59240 Gm15772-201ENSMUST00000118533 438 ntBASIC6.88□□□□□ -1.31
Nphp4P59240 Mup-ps18-201ENSMUST00000120145 531 ntBASIC6.88□□□□□ -1.31
Nphp4P59240 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.88□□□□□ -1.31
Nphp4P59240 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Nphp4P59240 Gm25534-201ENSMUST00000175365 125 ntBASIC6.88□□□□□ -1.31
Nphp4P59240 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC6.88□□□□□ -1.31
Nphp4P59240 Gm8999-201ENSMUST00000204951 969 ntBASIC6.88□□□□□ -1.31
Nphp4P59240 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Nphp4P59240 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.88□□□□□ -1.31
Nphp4P59240 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Nphp4P59240 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Nphp4P59240 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Nphp4P59240 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.88□□□□□ -1.31
Nphp4P59240 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Nphp4P59240 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Nphp4P59240 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nphp4P59240 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms