Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm27849-201ENSMUST00000183673 125 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.76□□□□□ -1.65
Foxa1P35582 Gm37293-201ENSMUST00000191658 295 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Gm37492-201ENSMUST00000191948 376 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Foxa1P35582 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.76□□□□□ -1.65
Foxa1P35582 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Foxa1P35582 Gm42437-201ENSMUST00000197263 923 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Gm42459-201ENSMUST00000199679 742 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Foxa1P35582 Gm18904-201ENSMUST00000218756 329 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.76□□□□□ -1.65
Foxa1P35582 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Foxa1P35582 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Foxa1P35582 Clec2j-201ENSMUST00000032517 515 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Foxa1P35582 Gm4822-201ENSMUST00000077551 479 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Gm25187-201ENSMUST00000083906 133 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Foxa1P35582 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Foxa1P35582 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.76□□□□□ -1.65
Foxa1P35582 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Foxa1P35582 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Foxa1P35582 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Foxa1P35582 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Foxa1P35582 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Foxa1P35582 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Foxa1P35582 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Foxa1P35582 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.75□□□□□ -1.65
Foxa1P35582 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm22273-201ENSMUST00000104040 132 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Gm14086-201ENSMUST00000117152 173 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Gm23837-201ENSMUST00000122656 286 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.75□□□□□ -1.65
Foxa1P35582 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Foxa1P35582 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm6542-201ENSMUST00000153606 772 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Gm25906-201ENSMUST00000158489 126 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Mir3110-201ENSMUST00000175053 80 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Gm3307-201ENSMUST00000176164 632 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm18177-201ENSMUST00000188373 404 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm34176-201ENSMUST00000192621 474 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Gm38011-201ENSMUST00000193312 279 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
Foxa1P35582 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.75□□□□□ -1.65
Foxa1P35582 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm24706-201ENSMUST00000082806 137 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm45177-201ENSMUST00000209104 2307 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC4.75□□□□□ -1.65
Foxa1P35582 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Foxa1P35582 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxa1P35582 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Foxa1P35582 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Foxa1P35582 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.75□□□□□ -1.65
Foxa1P35582 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxa1P35582 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxa1P35582 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.74□□□□□ -1.65
Foxa1P35582 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Foxa1P35582 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Foxa1P35582 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.74□□□□□ -1.65
Foxa1P35582 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxa1P35582 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Foxa1P35582 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.74□□□□□ -1.65
Foxa1P35582 Gm23692-201ENSMUST00000101881 160 ntBASIC4.74□□□□□ -1.65
Foxa1P35582 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms