Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Chmp6P0C0A3 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm23593-201ENSMUST00000104309 120 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm7206-201ENSMUST00000117730 508 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm13367-201ENSMUST00000119955 796 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm12413-201ENSMUST00000121508 312 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm11197-201ENSMUST00000145158 839 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Mir6400-201ENSMUST00000184870 92 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm4587-201ENSMUST00000209135 637 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.63□□□□□ -1.51
Chmp6P0C0A3 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm24429-201ENSMUST00000104076 132 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm14985-201ENSMUST00000118693 786 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm24860-201ENSMUST00000158457 276 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm25906-201ENSMUST00000158489 126 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm22698-201ENSMUST00000175375 108 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm42437-201ENSMUST00000197263 923 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm17984-201ENSMUST00000205286 859 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm18468-201ENSMUST00000207321 369 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm18470-201ENSMUST00000207467 420 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm18465-201ENSMUST00000207468 369 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm18464-201ENSMUST00000207803 420 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm18458-201ENSMUST00000207908 369 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm18461-201ENSMUST00000208421 420 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Clec2j-201ENSMUST00000032517 515 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp6P0C0A3 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Chmp6P0C0A3 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms