Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm8423-201ENSMUST00000211387 607 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm2089-201ENSMUST00000218294 479 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm20102-201ENSMUST00000222445 220 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm20302-201ENSMUST00000080671 275 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Olfr203-201ENSMUST00000089305 924 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm38173-201ENSMUST00000193126 2314 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm43187-201ENSMUST00000200652 2397 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm6820-201ENSMUST00000188803 2173 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm43681-201ENSMUST00000201581 1903 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm26945-201ENSMUST00000183191 2011 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC5.65□□□□□ -1.5
Hoxd3P09027 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Hoxd3P09027 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC5.65□□□□□ -1.5
Hoxd3P09027 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm10862-201ENSMUST00000193956 3350 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC5.65□□□□□ -1.5
Hoxd3P09027 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm19801-201ENSMUST00000218231 1882 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Hoxd3P09027 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Mir449c-201ENSMUST00000102192 109 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm25396-201ENSMUST00000103981 133 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm11936-201ENSMUST00000118323 160 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm13545-201ENSMUST00000119044 482 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm6744-201ENSMUST00000119303 543 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm14815-201ENSMUST00000120060 488 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm15763-201ENSMUST00000120136 403 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm14805-201ENSMUST00000120172 340 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm12518-201ENSMUST00000122075 779 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Mir1932-201ENSMUST00000157390 90 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm24499-201ENSMUST00000158446 104 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm7925-201ENSMUST00000166690 401 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC5.65□□□□□ -1.5
Hoxd3P09027 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm5147-201ENSMUST00000185999 794 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm29519-201ENSMUST00000186994 398 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm28416-201ENSMUST00000188334 292 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm18875-201ENSMUST00000188563 882 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm17965-201ENSMUST00000193904 517 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm43415-201ENSMUST00000201934 750 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm43929-201ENSMUST00000203025 409 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm43914-201ENSMUST00000203592 594 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Gm44147-201ENSMUST00000204658 94 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.65□□□□□ -1.5
Hoxd3P09027 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC5.65□□□□□ -1.5
Hoxd3P09027 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC5.65□□□□□ -1.5
Hoxd3P09027 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.65□□□□□ -1.5
Hoxd3P09027 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms