Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm8264-201ENSMUST00000217801 465 ntBASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm8158-201ENSMUST00000219220 465 ntBASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm8112-201ENSMUST00000219637 465 ntBASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm23948-201ENSMUST00000104030 132 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm38046-201ENSMUST00000192733 550 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm3148-201ENSMUST00000203594 612 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm46191-201ENSMUST00000218899 433 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm24166-201ENSMUST00000082724 135 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm9134-201ENSMUST00000193186 551 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm20940-201ENSMUST00000197308 360 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm19154-201ENSMUST00000223330 940 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Scn3aA2ASI5 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Scn3aA2ASI5 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm13033-201ENSMUST00000117591 1057 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm13867-201ENSMUST00000120844 395 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm37492-201ENSMUST00000191948 376 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm10292-202ENSMUST00000193165 585 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm45228-201ENSMUST00000206585 352 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm17999-201ENSMUST00000211568 542 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Scn3aA2ASI5 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.65□□□□□ -1.51
Scn3aA2ASI5 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm28567-201ENSMUST00000190270 693 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm37044-201ENSMUST00000193531 693 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm38369-201ENSMUST00000195101 693 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Gm29785-201ENSMUST00000217033 383 ntBASIC5.64□□□□□ -1.51
Scn3aA2ASI5 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms