Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scrt1Q99M85 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scrt1Q99M85 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Scrt1Q99M85 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.68□□□□□ -1.66
Scrt1Q99M85 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.68□□□□□ -1.66
Scrt1Q99M85 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Scrt1Q99M85 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scrt1Q99M85 Gm45183-201ENSMUST00000207937 1497 ntBASIC4.68□□□□□ -1.66
Scrt1Q99M85 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scrt1Q99M85 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Scrt1Q99M85 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm9408-201ENSMUST00000197375 1505 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm42798-201ENSMUST00000200853 3972 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm24429-201ENSMUST00000104076 132 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm3267-201ENSMUST00000118671 473 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm11699-201ENSMUST00000119016 401 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm6461-201ENSMUST00000120015 633 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm14620-201ENSMUST00000120656 383 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm12110-201ENSMUST00000121601 579 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm22870-201ENSMUST00000157501 112 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Scarna13-201ENSMUST00000158164 275 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm17046-201ENSMUST00000168078 850 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm8919-201ENSMUST00000182028 1014 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm42428-201ENSMUST00000198677 302 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm44548-201ENSMUST00000208929 192 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm7439-201ENSMUST00000214053 835 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm21041-201ENSMUST00000214829 823 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm272-201ENSMUST00000222073 919 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 AC154484.2-201ENSMUST00000228359 818 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC4.67□□□□□ -1.66
Scrt1Q99M85 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scrt1Q99M85 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm23839-201ENSMUST00000116957 109 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm13679-201ENSMUST00000118678 484 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm5405-201ENSMUST00000120478 609 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm14563-201ENSMUST00000120571 354 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Mir1947-201ENSMUST00000158235 85 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm25605-201ENSMUST00000158364 124 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm7316-201ENSMUST00000165395 445 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm8256-201ENSMUST00000169178 453 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scrt1Q99M85 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Mir409-201ENSMUST00000198153 79 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm18924-201ENSMUST00000211929 316 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.66□□□□□ -1.66
Scrt1Q99M85 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Scrt1Q99M85 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms