Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm25419-201ENSMUST00000104215 191 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Mir292-201ENSMUST00000104847 82 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm10936-201ENSMUST00000105264 252 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm13451-201ENSMUST00000117649 592 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm8202-201ENSMUST00000117682 310 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm14485-201ENSMUST00000119489 493 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm13489-201ENSMUST00000121234 971 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 AL645522.1-201ENSMUST00000197692 104 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 CT030242.3-201ENSMUST00000221231 581 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm6474-201ENSMUST00000223250 699 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 AC154305.3-201ENSMUST00000224661 552 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Snord59a-201ENSMUST00000082844 74 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm44751-201ENSMUST00000208302 4387 ntBASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Atg4aQ8C9S8 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 AC153532.3-201ENSMUST00000218660 3848 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm26067-201ENSMUST00000103789 110 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 H3f3c-201ENSMUST00000119459 411 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm23318-201ENSMUST00000158000 108 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm38217-201ENSMUST00000194358 910 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm5842-201ENSMUST00000195073 622 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Mirlet7e-201ENSMUST00000196737 93 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 AC137127.3-201ENSMUST00000213340 349 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm2099-201ENSMUST00000220979 412 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm23514-201ENSMUST00000082827 130 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.17□□□□□ -1.42
Atg4aQ8C9S8 AC139218.1-201ENSMUST00000228215 4287 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm22273-201ENSMUST00000104040 132 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm23274-201ENSMUST00000104056 130 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm14995-201ENSMUST00000117135 391 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm13484-201ENSMUST00000120738 412 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm24371-201ENSMUST00000122662 267 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm23250-201ENSMUST00000157444 267 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm23965-201ENSMUST00000157969 142 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Gm28468-201ENSMUST00000188536 615 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.16□□□□□ -1.42
Atg4aQ8C9S8 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms