Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne3Q4FZC9 Gm6982-201ENSMUST00000118752 1560 ntBASIC6.09□□□□□ -1.43
Syne3Q4FZC9 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Syne3Q4FZC9 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
Syne3Q4FZC9 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.09□□□□□ -1.44
Syne3Q4FZC9 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Syne3Q4FZC9 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Syne3Q4FZC9 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
Syne3Q4FZC9 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm13641-201ENSMUST00000117993 473 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm12889-201ENSMUST00000118684 241 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm15400-201ENSMUST00000118944 601 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm12881-201ENSMUST00000121191 203 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm11848-201ENSMUST00000121207 973 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm8761-201ENSMUST00000121507 955 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm14679-201ENSMUST00000121536 722 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm4660-201ENSMUST00000131499 403 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm9006-201ENSMUST00000165520 841 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm17655-201ENSMUST00000167969 255 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm27006-201ENSMUST00000182218 943 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm27460-201ENSMUST00000184213 100 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Mir6952-201ENSMUST00000185092 61 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm7634-201ENSMUST00000185778 553 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm43779-201ENSMUST00000196691 829 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm9245-201ENSMUST00000200528 983 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm42961-201ENSMUST00000202023 181 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm44091-201ENSMUST00000205212 649 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm18877-201ENSMUST00000207706 539 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm8748-201ENSMUST00000211125 587 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 AC117656.3-205ENSMUST00000224606 1205 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm25515-201ENSMUST00000083858 157 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm22444-201ENSMUST00000093693 108 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.08□□□□□ -1.44
Syne3Q4FZC9 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm13679-201ENSMUST00000118678 484 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm14985-201ENSMUST00000118693 786 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm14930-201ENSMUST00000118864 652 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm14267-201ENSMUST00000119751 496 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm12488-201ENSMUST00000122449 499 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm22492-201ENSMUST00000157192 297 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm23279-201ENSMUST00000157912 97 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm23408-201ENSMUST00000158523 265 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm24343-201ENSMUST00000158708 111 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm7745-201ENSMUST00000182235 973 ntBASIC6.07□□□□□ -1.44
Syne3Q4FZC9 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms