Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Usp47Q8BY87 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC7.24□□□□□ -1.25
Usp47Q8BY87 CT030159.1-201ENSMUST00000221580 2261 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm37767-201ENSMUST00000193239 1834 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm3267-201ENSMUST00000118671 473 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm12444-201ENSMUST00000121512 877 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm16345-201ENSMUST00000146065 158 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm27820-201ENSMUST00000183628 175 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm27818-201ENSMUST00000184536 159 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm28097-201ENSMUST00000187333 366 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm37884-201ENSMUST00000191857 818 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm18127-201ENSMUST00000208479 725 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp47Q8BY87 CT025710.1-201ENSMUST00000222949 2533 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp47Q8BY87 Gm45177-201ENSMUST00000209104 2307 ntBASIC7.24□□□□□ -1.25
Usp47Q8BY87 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp47Q8BY87 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm37551-201ENSMUST00000195556 2861 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm29112-201ENSMUST00000188962 3487 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm11346-201ENSMUST00000118346 704 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm11790-201ENSMUST00000119569 455 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm9457-201ENSMUST00000180176 372 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm18177-201ENSMUST00000188373 404 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm6906-201ENSMUST00000218014 569 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 CT030242.3-201ENSMUST00000221231 581 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm5374-202ENSMUST00000222910 314 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm26330-201ENSMUST00000082817 104 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 AC131329.1-201ENSMUST00000221204 3487 ntBASIC7.23□□□□□ -1.25
Usp47Q8BY87 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp47Q8BY87 Gm19136-201ENSMUST00000190706 2067 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 Gm23948-201ENSMUST00000104030 132 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Gm15390-201ENSMUST00000120323 738 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Gm5777-201ENSMUST00000177265 448 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 Mir6926-201ENSMUST00000184562 68 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 Gm45032-201ENSMUST00000205375 520 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Gm17999-201ENSMUST00000211568 542 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 AC157515.1-201ENSMUST00000220953 450 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 AC211878.2-201ENSMUST00000222486 488 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 AC125539.2-202ENSMUST00000227983 587 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 AC125539.2-201ENSMUST00000228339 753 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 Gm5215-201ENSMUST00000054380 405 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Usp47Q8BY87 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC7.22□□□□□ -1.25
Usp47Q8BY87 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Usp47Q8BY87 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC7.21□□□□□ -1.25
Usp47Q8BY87 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Usp47Q8BY87 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC7.21□□□□□ -1.25
Usp47Q8BY87 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC7.21□□□□□ -1.25
Usp47Q8BY87 Gm16456-201ENSMUST00000174431 920 ntBASIC7.21□□□□□ -1.25
Usp47Q8BY87 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC7.21□□□□□ -1.25
Usp47Q8BY87 Gm27551-201ENSMUST00000184258 77 ntBASIC7.21□□□□□ -1.25
Usp47Q8BY87 Gm9238-201ENSMUST00000196181 329 ntBASIC7.21□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms