Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm23692-201ENSMUST00000101881 160 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm3267-201ENSMUST00000118671 473 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm3931-201ENSMUST00000119038 455 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm11278-201ENSMUST00000121002 997 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm13077-201ENSMUST00000121941 484 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm7973-201ENSMUST00000122107 488 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm8480-201ENSMUST00000190350 698 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm43629-201ENSMUST00000201782 704 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm42662-201ENSMUST00000202539 1431 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm44074-201ENSMUST00000204562 337 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Supt4b-201ENSMUST00000214434 351 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 AC117608.2-201ENSMUST00000224124 1363 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gm22741-201ENSMUST00000083438 165 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Mir17-201ENSMUST00000083574 84 ntBASIC4.59□□□□□ -1.67
Nkx3-1P97436 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Nkx3-1P97436 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm22266-201ENSMUST00000104011 138 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm11759-201ENSMUST00000121742 464 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm25179-201ENSMUST00000122632 128 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm26310-201ENSMUST00000157766 117 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm22725-201ENSMUST00000158092 110 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Olfr331-202ENSMUST00000170501 957 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm23162-201ENSMUST00000175081 121 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm22852-201ENSMUST00000177899 101 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm9457-201ENSMUST00000180176 372 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm18717-201ENSMUST00000192744 1241 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm43408-201ENSMUST00000198263 440 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm44134-202ENSMUST00000204777 545 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm40598-201ENSMUST00000222953 547 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Nkx3-1P97436 AC153912.2-201ENSMUST00000215840 2015 ntBASIC4.58□□□□□ -1.68
Nkx3-1P97436 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nkx3-1P97436 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms