Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PdfS4R2K0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PdfS4R2K0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
PdfS4R2K0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.62□□□□□ -0.23
PdfS4R2K0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.62□□□□□ -0.23
PdfS4R2K0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdfS4R2K0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.61□□□□□ -0.23
PdfS4R2K0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.61□□□□□ -0.23
PdfS4R2K0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.61□□□□□ -0.23
PdfS4R2K0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PdfS4R2K0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PdfS4R2K0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdfS4R2K0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.6□□□□□ -0.23
PdfS4R2K0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
PdfS4R2K0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PdfS4R2K0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.6□□□□□ -0.23
PdfS4R2K0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.6□□□□□ -0.23
PdfS4R2K0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.6□□□□□ -0.23
PdfS4R2K0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PdfS4R2K0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
PdfS4R2K0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PdfS4R2K0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdfS4R2K0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PdfS4R2K0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PdfS4R2K0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.59□□□□□ -0.23
PdfS4R2K0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.59□□□□□ -0.23
PdfS4R2K0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.59□□□□□ -0.23
PdfS4R2K0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Gm10493-201ENSMUST00000097270 612 ntBASIC13.59□□□□□ -0.23
PdfS4R2K0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PdfS4R2K0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.59□□□□□ -0.23
PdfS4R2K0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.59□□□□□ -0.23
PdfS4R2K0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PdfS4R2K0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdfS4R2K0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PdfS4R2K0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PdfS4R2K0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PdfS4R2K0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PdfS4R2K0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PdfS4R2K0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PdfS4R2K0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PdfS4R2K0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PdfS4R2K0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PdfS4R2K0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms