Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Gm38205-201ENSMUST00000192243 258 ntBASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ap4s1Q9WVL1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Gm45102-201ENSMUST00000207427 857 ntBASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ap4s1Q9WVL1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Idnk-204ENSMUST00000226010 1898 ntBASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Gm14117-201ENSMUST00000122417 843 ntBASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ap4s1Q9WVL1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ap4s1Q9WVL1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ap4s1Q9WVL1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ap4s1Q9WVL1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ap4s1Q9WVL1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ap4s1Q9WVL1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ap4s1Q9WVL1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ap4s1Q9WVL1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ap4s1Q9WVL1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ap4s1Q9WVL1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ap4s1Q9WVL1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ap4s1Q9WVL1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms