Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx9Q9WUH2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Gm18025-201ENSMUST00000221733 862 ntBASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx9Q9WUH2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Gm5417-201ENSMUST00000079706 384 ntBASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Lhx9Q9WUH2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx9Q9WUH2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Mir2861-201ENSMUST00000175539 82 ntBASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Gm42545-201ENSMUST00000202755 922 ntBASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx9Q9WUH2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Idnk-204ENSMUST00000226010 1898 ntBASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Gm11643-201ENSMUST00000119578 864 ntBASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lhx9Q9WUH2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms