Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.07■□□□□ 0
Col13a1Q9R1N9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.07■□□□□ 0
Col13a1Q9R1N9 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.07■□□□□ 0
Col13a1Q9R1N9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Gm17971-201ENSMUST00000190239 806 ntBASIC15.06■□□□□ 0
Col13a1Q9R1N9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col13a1Q9R1N9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col13a1Q9R1N9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Col13a1Q9R1N9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col13a1Q9R1N9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Gm15375-201ENSMUST00000119510 849 ntBASIC15.05■□□□□ -0
Col13a1Q9R1N9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Gm7284-201ENSMUST00000131667 944 ntBASIC15.05■□□□□ -0
Col13a1Q9R1N9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col13a1Q9R1N9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Gm25925-201ENSMUST00000158314 306 ntBASIC15.04■□□□□ -0
Col13a1Q9R1N9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Gm45058-201ENSMUST00000205810 766 ntBASIC15.04■□□□□ -0
Col13a1Q9R1N9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.04■□□□□ -0
Col13a1Q9R1N9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col13a1Q9R1N9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.03■□□□□ -0
Col13a1Q9R1N9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Rarb-207ENSMUST00000225921 2756 ntBASIC15.03■□□□□ -0
Col13a1Q9R1N9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Zfp783-201ENSMUST00000095946 670 ntBASIC15.03■□□□□ -0
Col13a1Q9R1N9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms