Protein–RNA interactions for Protein: Q9QY61

Irx4, Iroquois-class homeodomain protein IRX-4, mousemouse

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irx4Q9QY61 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Irx4Q9QY61 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Irx4Q9QY61 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.46■□□□□ 0.71
Irx4Q9QY61 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Irx4Q9QY61 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Irx4Q9QY61 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Irx4Q9QY61 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Irx4Q9QY61 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Gm43017-201ENSMUST00000198296 752 ntBASIC19.45■□□□□ 0.7
Irx4Q9QY61 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.45■□□□□ 0.7
Irx4Q9QY61 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.45■□□□□ 0.7
Irx4Q9QY61 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.45■□□□□ 0.7
Irx4Q9QY61 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.45■□□□□ 0.7
Irx4Q9QY61 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Irx4Q9QY61 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.44■□□□□ 0.7
Irx4Q9QY61 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irx4Q9QY61 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx4Q9QY61 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx4Q9QY61 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.42■□□□□ 0.7
Irx4Q9QY61 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx4Q9QY61 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx4Q9QY61 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx4Q9QY61 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Irx4Q9QY61 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx4Q9QY61 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx4Q9QY61 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.42■□□□□ 0.7
Irx4Q9QY61 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx4Q9QY61 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.41■□□□□ 0.7
Irx4Q9QY61 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.41■□□□□ 0.7
Irx4Q9QY61 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Irx4Q9QY61 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Irx4Q9QY61 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms