Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim39Q9ESN2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim39Q9ESN2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim39Q9ESN2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim39Q9ESN2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim39Q9ESN2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim39Q9ESN2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim39Q9ESN2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim39Q9ESN2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim39Q9ESN2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim39Q9ESN2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim39Q9ESN2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Gm27405-201ENSMUST00000184201 112 ntBASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim39Q9ESN2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim39Q9ESN2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim39Q9ESN2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim39Q9ESN2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim39Q9ESN2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trim39Q9ESN2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim39Q9ESN2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim39Q9ESN2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim39Q9ESN2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim39Q9ESN2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim39Q9ESN2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Trim39Q9ESN2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim39Q9ESN2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim39Q9ESN2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Trim39Q9ESN2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.51■□□□□ 0.23
Trim39Q9ESN2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms