Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Fst-202ENSMUST00000223640 2612 ntBASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Gm12382-201ENSMUST00000122005 922 ntBASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ripk4Q9ERK0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Gm37292-201ENSMUST00000192062 758 ntBASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Gm43799-201ENSMUST00000201845 579 ntBASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk4Q9ERK0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ripk4Q9ERK0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ripk4Q9ERK0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC21.58■■□□□ 1.05
Ripk4Q9ERK0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ripk4Q9ERK0 Gm21814-202ENSMUST00000203277 873 ntBASIC21.58■■□□□ 1.05
Ripk4Q9ERK0 Gm30025-201ENSMUST00000218555 728 ntBASIC21.58■■□□□ 1.05
Ripk4Q9ERK0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ripk4Q9ERK0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ripk4Q9ERK0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.58■■□□□ 1.04
Ripk4Q9ERK0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ripk4Q9ERK0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
Ripk4Q9ERK0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ripk4Q9ERK0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.58■■□□□ 1.04
Ripk4Q9ERK0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Ripk4Q9ERK0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.58■■□□□ 1.04
Ripk4Q9ERK0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Ripk4Q9ERK0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ripk4Q9ERK0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk4Q9ERK0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk4Q9ERK0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Timm23-208ENSMUST00000226683 750 ntBASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ripk4Q9ERK0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ripk4Q9ERK0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.54■■□□□ 1.04
Ripk4Q9ERK0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.54■■□□□ 1.04
Ripk4Q9ERK0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Ripk4Q9ERK0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms