Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Gm45102-201ENSMUST00000207427 857 ntBASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmg20aQ9DC33 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmg20aQ9DC33 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmg20aQ9DC33 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Hmg20aQ9DC33 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Hmg20aQ9DC33 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hmg20aQ9DC33 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.2■□□□□ 0.18
Hmg20aQ9DC33 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmg20aQ9DC33 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmg20aQ9DC33 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hmg20aQ9DC33 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms