Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc96Q9CR92 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc96Q9CR92 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Gm27275-201ENSMUST00000184318 272 ntBASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc96Q9CR92 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Ccdc96Q9CR92 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.22■□□□□ 0.83
Ccdc96Q9CR92 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc96Q9CR92 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc96Q9CR92 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc96Q9CR92 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms